STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_10303RNase H domain-containing protein. (199 aa)    
Predicted Functional Partners:
PIIN_05744
Probable PHO81-cyclin-dependent kinase inhibitor.
    
 0.808
PIIN_06586
Uncharacterized protein; Belongs to the complex I LYR family.
    
 0.738
PIIN_01772
Probable 60s ribosomal protein L21-A.
   
   0.718
PIIN_07364
Probable RPN11-26S proteasome regulatory subunit.
    
 0.715
PIIN_03006
Probable ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
   0.670
PIIN_09249
Probable RPL2A-ribosomal protein L8.e.
   
 
 0.668
PIIN_04681
Probable ubiquitin/ribosomal protein S27a fusion protein.
    
  0.666
PIIN_05020
CIA30 domain-containing protein.
    
  0.666
PIIN_07813
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.642
PIIN_02772
Probable TOM40-mitochondrial import receptor (MOM38).
   
 0.638
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.