STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_10533Uncharacterized protein. (295 aa)    
Predicted Functional Partners:
PIIN_04572
Uncharacterized protein.
    
 0.843
PIIN_02213
Uncharacterized protein.
    
 0.763
PIIN_00120
Related to anti-silencing protein 1.
    
 0.735
PIIN_00972
Probable mrna export factor elf1.
    
   0.688
PIIN_02378
Probable YEF3-translation elongation factor eEF3.
    
   0.647
PIIN_09764
Related to histone transcription regulator HIP1.
    
 0.642
PIIN_10591
Related to histone transcription regulator.
    
 0.642
PIIN_03840
Probable ribosomal protein S28B.
   
   0.639
PIIN_06011
Uncharacterized protein.
   
 
  0.630
PIIN_09707
Probable translation initiation factor eIF-4A, exon junction complex; Belongs to the DEAD box helicase family.
    
  0.628
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.