STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_11362Uncharacterized protein. (317 aa)    
Predicted Functional Partners:
PIIN_05038
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 0.973
PIIN_06543
Uncharacterized protein.
   
 0.973
PIIN_01516
Uncharacterized protein.
    
 0.972
PIIN_01599
Uncharacterized protein.
   
 0.966
PIIN_06691
Uncharacterized protein.
    
 0.961
PIIN_00527
Related to conserved oligomeric Golgi complex component 4.
    
 0.955
PIIN_02702
Related to vacuolar protein sorting-associated protein 54-Laccaria bicolor.
     
 0.753
PIIN_08455
Related to the member of the syntaxin family of t-SNAREs TLG2; Belongs to the syntaxin family.
     
 0.748
PIIN_08518
Probable syntaxin, vesicular transport protein.
     
 0.747
PIIN_07899
Related to VTI1-v-SNARE: involved in Golgi retrograde protein traffic.
     
 0.746
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.