STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_10544Uncharacterized protein. (455 aa)    
Predicted Functional Partners:
PIIN_09549
Related to ATP-dependent DNA helicase II, 80 kDa subunit.
   
 0.948
PIIN_02626
Uncharacterized protein.
 
     0.946
PIIN_05840
Related to ATP-dependent DNA helicase II, 70 kDa subunit.
   
 0.944
PIIN_01285
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.925
PIIN_06722
Related to EXO1-exonuclease which interacts with Msh2p.
   
 0.779
PIIN_11687
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.774
PIIN_08412
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.774
PIIN_09229
Related to nucleolar 100K polymyositis-scleroderma protein.
   
 0.774
PIIN_11826
Probable RAD50-DNA repair protein.
   
 0.763
PIIN_03312
DNA polymerase.
   
 0.758
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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