STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_00490Uncharacterized protein. (1083 aa)    
Predicted Functional Partners:
PIIN_02873
Probable vacuolar aspartic proteasse.
    
  0.634
PIIN_01256
Uncharacterized protein.
    
 
 0.630
PIIN_03628
Uncharacterized protein.
    
 
 0.630
PIIN_02875
Uncharacterized protein.
    
 
 0.609
PIIN_05678
Related to IME4-positive transcription factor for IME2; Belongs to the MT-A70-like family.
    
 
 0.591
PIIN_05225
Uncharacterized protein; Belongs to the MT-A70-like family.
    
 
 0.587
PIIN_00882
Related to mRNA export factor mex67.
    
 
 0.498
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.