STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_00531Related to GLY1-L-threonine aldolase, low-specific. (403 aa)    
Predicted Functional Partners:
PIIN_00477
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.921
PIIN_02254
Probable threonine synthase.
   
 0.910
PIIN_05583
Probable AGX1-alanine-glyoxylate transaminase.
    
 0.910
PIIN_01323
Threonine dehydratase.
   
 
 0.897
PIIN_05307
DAO domain-containing protein.
   
 0.879
PIIN_03160
Probable GCV2-glycine decarboxylase P subunit.
    
 0.875
PIIN_06148
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
   
 0.871
PIIN_00952
Related to 8-amino-7-oxononanoate synthase.
   
 
 0.866
PIIN_05914
Related to L-serine dehydratase.
   
 
 0.866
PIIN_05028
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
    
 0.863
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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