STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMO_0407Outer membrane protein and related peptidoglycan-associated lipo protein. (281 aa)    
Predicted Functional Partners:
TMO_1773
Outer membrane protein.
 
 
 0.870
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.811
TMO_2889
Hypothetical protein.
  
     0.733
TMO_3426
Outer membrane protein (porin).
  
 
 0.727
TMO_3425
Outer membrane protein (porin).
  
 
 0.721
TMO_3423
Hypothetical protein.
  
   
 0.709
TMO_3424
Outer membrane protein (porin).
  
 
 0.697
surA
Parvulin-like peptidyl-prolyl isomerase.
 
   
 0.695
TMO_0763
Cell shape-determining protein.
  
  
 0.648
mrdA
Penicillin binding protein 2.
  
   
 0.602
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.