STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amiC-2Two component sensor kinase. (376 aa)    
Predicted Functional Partners:
amiR
Two component response regulator.
 
 
 0.964
livM-5
Branched chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.859
livH-5
High-affinity branched-chain amino acid transport system permease protein livH; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.853
livM-2
Putative branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.847
braD
Putative permease component of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.839
livF-6
ABC transporter, nucleotide binding/ATPase protein (urea/amide).
 
  
 0.831
braG
Putative branched-chain amino acid ABC transporter, ATP-binding protein.
 
  
 0.815
braF-5
Putative ATP-binding component of ABC transporter.
 
   
 0.806
braF
Branched chain amino acid ABC transporter ATP-binding protein.
 
   
 0.790
ntrX
Response regulator containing CheY-like receiver.
 
    
 0.712
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.