STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMO_0575Hypothetical protein. (247 aa)    
Predicted Functional Partners:
TMO_0576
Heat shock protein DnaJ-like protein.
 
     0.942
TMO_0574
Chromosome partitioning protein.
       0.552
cobN
Cobaltochelatase.
  
 
 0.541
TMO_2371
Phage tape measure protein.
  
     0.488
exoN
UTP--glucose-1-phosphate uridylyltransferase.
       0.487
TMO_1143
Hypothetical protein.
  
     0.476
TMO_2564
Hypothetical protein.
  
     0.475
cobL
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
     
 0.468
TMO_3359
Hypothetical protein.
  
     0.447
TMO_0020
ABC-2 type transporter.
 
     0.445
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.