Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| TMO_0575 | TMO_0576 | TMO_0575 | TMO_0576 | Hypothetical protein. | Heat shock protein DnaJ-like protein. | 0.942 |
| TMO_0576 | TMO_0575 | TMO_0576 | TMO_0575 | Heat shock protein DnaJ-like protein. | Hypothetical protein. | 0.942 |
| TMO_0576 | dnaK | TMO_0576 | TMO_3474 | Heat shock protein DnaJ-like protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.856 |
| TMO_0576 | eryA | TMO_0576 | TMO_0487 | Heat shock protein DnaJ-like protein. | Polyketide synthase. | 0.828 |
| TMO_0576 | groL | TMO_0576 | TMO_1696 | Heat shock protein DnaJ-like protein. | GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.698 |
| TMO_0576 | grpE | TMO_0576 | TMO_3473 | Heat shock protein DnaJ-like protein. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.772 |
| TMO_0576 | htpG | TMO_0576 | TMO_3058 | Heat shock protein DnaJ-like protein. | Chaperone protein htpG; Molecular chaperone. Has ATPase activity. | 0.858 |
| TMO_0576 | rplM | TMO_0576 | TMO_1790 | Heat shock protein DnaJ-like protein. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.676 |
| TMO_0576 | rplQ | TMO_0576 | TMO_2607 | Heat shock protein DnaJ-like protein. | 50S ribosomal protein L17. | 0.684 |
| TMO_0576 | sodB | TMO_0576 | TMO_1550 | Heat shock protein DnaJ-like protein. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.676 |
| TMO_0576 | yegD | TMO_0576 | TMO_3284 | Heat shock protein DnaJ-like protein. | Chaperone protein yegD. | 0.856 |
| dnaK | TMO_0576 | TMO_3474 | TMO_0576 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Heat shock protein DnaJ-like protein. | 0.856 |
| dnaK | eryA | TMO_3474 | TMO_0487 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Polyketide synthase. | 0.588 |
| dnaK | groL | TMO_3474 | TMO_1696 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.973 |
| dnaK | grpE | TMO_3474 | TMO_3473 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.997 |
| dnaK | htpG | TMO_3474 | TMO_3058 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Chaperone protein htpG; Molecular chaperone. Has ATPase activity. | 0.995 |
| dnaK | rplM | TMO_3474 | TMO_1790 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.551 |
| eryA | TMO_0576 | TMO_0487 | TMO_0576 | Polyketide synthase. | Heat shock protein DnaJ-like protein. | 0.828 |
| eryA | dnaK | TMO_0487 | TMO_3474 | Polyketide synthase. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.588 |
| eryA | groL | TMO_0487 | TMO_1696 | Polyketide synthase. | GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.632 |
page 1 of 4