STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yngJacyl-CoA dehydrogenase. (382 aa)    
Predicted Functional Partners:
yngJ-2
pimeloyl-CoA dehydrogenase, large subunit.
    
0.980
yngJ-3
Putative acyl-CoA dehydrogenase yngJ.
 
    
0.927
TMO_0632
Peroxisomal bifunctional enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.915
TMO_1791
Enoyl-CoA hydratase/carnithine racemase.
  
 0.712
TMO_3563
enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.712
TMO_2578
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.682
eryA
Polyketide synthase.
  
 0.670
etfA
Electron transfer flavoprotein alpha subunit.
 
 0.643
TMO_2034
AMP-dependent synthetase and ligase.
  
 0.630
TMO_3063
Long-chain acyl-CoA synthetases (AMP-forming).
  
 0.630
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.