STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMO_0697acyl-CoA dehydrogenase. (383 aa)    
Predicted Functional Partners:
TMO_2578
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.946
phaA
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.943
TMO_2408
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.938
etfA
Electron transfer flavoprotein alpha subunit.
 
 0.936
TMO_2575
Carboxyltransferase subunit of acetyl-CoA carboxylase.
 
 
 0.930
TMO_2573
3-methylcrotonoyl-CoA carboxylase subunit alpha.
  
 0.925
TMO_0510
acyl-CoA dehydrogenase domain-containing protein.
  
  
 
0.914
lcfA-3
acyl-CoA synthase.
 
 
  0.889
TMO_0699
enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.870
TMO_0632
Peroxisomal bifunctional enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.808
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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