STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yufO-2ABC transporter, ATP-binding protein. (518 aa)    
Predicted Functional Partners:
yufQ
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
yufP-2
Permease protein of sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
TMO_0863
Basic membrane lipoprotein.
 
 
 0.990
yufP
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.981
TMO_0673
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.977
TMO_1193
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.977
TMO_1194
Putative simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.976
TMO_0676
Transcriptional activator protein med.
 
 
 0.943
TMO_1195
Simple sugar transport system substrate-binding protein.
 
 
 0.929
yufO
ABC transporter component.
  
  
 
0.912
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.