STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMO_0869Binding-protein-dependent transport systems inner membrane component. (281 aa)    
Predicted Functional Partners:
TMO_0868
Glycine betaine/proline transport system substrate-binding protein.
 
 0.999
proV
Glycine betaine/L-proline ABC transporter, ATPase subunit.
 0.999
proX
Glycine betaine-binding periplasmic protein.
 
 0.998
TMO_2951
Putative glycine betaine/L-proline transport ATP binding subunit.
 0.996
osmF
Substrate-binding region of ABC-type glycine betaine transport system.
 
 
  
 0.905
proW
Histidine transport system permease ABC transporter protein.
  
  
 
0.904
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
  
 0.436
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.