STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutSCarbon monoxide dehydrogenase small chain. (156 aa)    
Predicted Functional Partners:
cutM
Carbon-monoxide dehydrogenase (acceptor).
 
 0.998
cutL-2
Carbon monoxide dehydrogenase large chain.
 
 0.997
cutL
Carbon-monoxide dehydrogenase (acceptor).
 
 0.994
coxL
Carbon monoxide dehydrogenase large chain.
 
 0.994
iorB
Twin-arginine translocation pathway signal.
 
 0.976
pucA
Xanthine dehydrogenase accessory factor.
 
  
 0.876
yqeB
XdhC/CoxI family protein.
 
  
 0.859
TMO_1169
Molybdopterin binding domain-containing protein.
 
  
 0.810
ybdL
Putative cysteine-S-conjugate beta-lyase.
 
      0.686
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.