STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMO_1286AMP-binding domain protein. (644 aa)    
Predicted Functional Partners:
eryA
Polyketide synthase.
 
 0.810
TMO_1285
enoyl-CoA hydratase/isomerase.
  
 
 0.650
dhbF
Syringomycin synthetase.
 
0.550
TMO_0120
Acyl-CoA dehydrogenase.
  
 
  0.529
mmgC
Putative acyl-CoA dehydrogenase.
 
 
  0.529
TMO_0510
acyl-CoA dehydrogenase domain-containing protein.
 
 
  0.529
TMO_0522
acyl-CoA dehydrogenase domain protein.
  
 
  0.529
TMO_0629
acyl-CoA dehydrogenase family protein.
  
 
  0.529
yngJ
acyl-CoA dehydrogenase.
  
 
  0.529
yngJ-2
pimeloyl-CoA dehydrogenase, large subunit.
  
 
  0.529
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.