STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMO_1469Molybdopterin oxidoreductase, iron-sulfur binding subunit. (616 aa)    
Predicted Functional Partners:
hmeA
Molybdopterin oxidoreductase, iron-sulfur binding subunit.
 
 0.999
TMO_1471
Polysulfide reductase NrfD.
 
 
 0.989
TMO_1468
Chaperone protein HtpG.
 
 
 0.979
ctaC
Cytochrome c oxidase, subunit II.
 
 
 0.970
TMO_1472
Transmembrane prediction.
 
 
 0.961
TMO_1473
Hypothetical protein.
 
 
 0.961
TMO_1474
Hypothetical protein.
 
 
 
 0.960
TMO_1477
Electron transport protein SCO1/SenC.
 
   
 0.949
ctaE
Cytochrome c oxidase subunit III.
 
   
 0.932
ctaD
Cytochrome c oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.905
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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