STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMO_2012Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein. (398 aa)    
Predicted Functional Partners:
braD-3
Putative amino acid or sugar ABC transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.910
TMO_2008
Putative amino acid or sugar ABC transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
    0.905
braF-6
ABC transporter ATPase.
 
    0.905
livF-7
High-affinity branched-chain amino acid transport ATP-binding protein.
 
  
 0.899
amiR
Two component response regulator.
  
 
 0.752
livM-3
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.678
livH-2
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.675
dctP-4
C4-dicarboxylate-binding periplasmic protein.
  
     0.636
TMO_2527
Tripartite ATP-independent periplasmic transporter DctQ component.
  
     0.628
TMO_0282
TRAP dicarboxylate transporter, DctQ subunit.
  
     0.627
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.