STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMO_2032Luciferase family protein. (379 aa)    
Predicted Functional Partners:
dhbF
Syringomycin synthetase.
   
 
 0.709
TMO_2033
enoyl-CoA hydratase/isomerase.
     
 0.679
eryA
Polyketide synthase.
  
  
 0.657
ntaB
Nitrilotriacetate monooxygenase component B protein.
 
  
 0.623
TMO_1047
Flavin reductase like domain protein.
 
  
 0.589
cmpB
Sulfate ester transporter permease protein.
 
  
 0.572
TMO_2031
Creatininase.
 
     0.551
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
  
 0.500
paaF
enoyl-CoA hydratase/isomerase.
     
 0.482
ppsD
AMP-dependent synthetase and ligase.
    
 0.474
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.