STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trbBConjugal transfer protein trbB. (306 aa)    
Predicted Functional Partners:
TMO_2194
Conjugal transfer protein TrbC.
  
 0.999
trbE
Conjugal transfer ATPase TrbE.
 
  
 0.996
TMO_2191
P-type conjugative transfer protein TrbJ.
 
  
 0.995
TMO_2193
Type IV secretory pathway VirB3 family protein.
 
  
 0.995
trbI
Conjugation TrbI family protein.
 
  
 0.983
trbG
P-type conjugative transfer protein TrbG.
 
  
 0.983
trbF
Conjugal transfer protein.
 
  
 0.982
trbL
P-type conjugative transfer protein TrbL.
 
  
 0.982
traG
TRAG protein.
   
 0.884
TMO_2196
Hypothetical protein.
     0.836
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.