STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMO_2311TRAP dicarboxylate transporter, DctM subunit. (431 aa)    
Predicted Functional Partners:
TMO_2309
DctP.
 
    0.918
TMO_2310
Tripartite ATP-independent periplasmic transporter DctQ.
 
   0.858
yiiZ
TRAP dicarboxylate transporter- DctP subunit.
 
    0.791
TMO_0145
TRAP dicarboxylate transporter, DctP subunit.
    0.790
TMO_1407
TRAP dicarboxylate transporter- DctP subunit.
 
    0.785
TMO_1202
TRAP dicarboxylate transporter- DctP subunit.
 
    0.780
dctP-2
C4-dicarboxylate-binding periplasmic protein.
 
    0.769
siaP-2
TRAP dicarboxylate transporter- DctP subunit.
 
    0.766
siaP
Bacterial extracellular solute-binding protein, family 7.
 
    0.712
dctB
Putative TrapT family, dctP subunit, C4-dicarboxylate periplasmic binding protein.
 
    0.707
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.