STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMO_2380Phage virion morphogenesis protein. (171 aa)    
Predicted Functional Partners:
TMO_2381
Putative head morphogenesis protein SPP1 gp7.
 
  
 0.914
TMO_2375
Hypothetical protein.
 
    0.885
TMO_2379
Hypothetical protein.
 
    0.865
TMO_2382
F, portal protein.
 
    0.858
TMO_2383
Putative phage-related protein.
 
     0.837
TMO_2392
Mu-like prophage protein GP16.
 
     0.828
TMO_2402
Phage transposition protein B.
 
     0.808
TMO_2404
Transposase-like Mu.
 
     0.803
TMO_2390
Hypothetical protein.
  
    0.519
TMO_2377
Phage capsid protein.
       0.502
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.