STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aapJGeneral L-amino acid transport system substrate-binding protein. (343 aa)    
Predicted Functional Partners:
aapM
General L-amino acid transport system permease protein.
 
 0.994
aapP
ABC transporter component.
 
 0.993
yhdX
Putative amino acid ABC transporter permease protein.
 
 
 0.992
glnQ
Glutamine transport ATP-binding protein glnQ.
 
 
 0.559
TMO_0158
PAS/PAC sensor hybrid histidine kinase.
   
 
 0.539
yecS
Polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.501
TMO_2864
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 
 
 0.498
gltB
Glutamate synthase(NADPH) large subunit.
  
  
 0.475
fruB
Phosphotransferase system, enzyme I.
     
 0.413
aotP
Arginine/ornithine transport ATP-binding protein aotP.
 
  
 0.404
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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