STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMO_2597FAD linked oxidase domain protein. (479 aa)    
Predicted Functional Partners:
etfA
Electron transfer flavoprotein alpha subunit.
 
 
 0.752
etfB
Electron transfer flavoprotein, beta subunit.
 
 
 0.730
eryA
Polyketide synthase.
  
 
 0.636
ubiA
4-hydroxybenzoate polyprenyltransferase-related prenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
    
 0.633
TMO_0463
FMN-dependent alpha-hydroxy acid dehydrogenase.
 0.612
gltB
Glutamate synthase(NADPH) large subunit.
     
 0.586
acyP
Acylphosphatase.
       0.581
TMO_2672
Dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
  
 0.519
TMO_2595
Hypothetical protein.
       0.496
TMO_3384
Putative Fe-S oxidoreductase.
 
  
 0.493
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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