STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMO_2922Periplasmic binding protein. (375 aa)    
Predicted Functional Partners:
TMO_2921
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.977
hmuV-3
ABC transporter related protein.
 
 
 0.976
TMO_2923
Hypothetical protein.
       0.791
hmuU
Putative ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.729
hmuV
ABC-type hemin transport system, ATPase component.
 
 
 0.686
TMO_2289
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.682
TMO_2924
TonB-dependent receptor.
  
  
 0.669
hmuV-2
ABC transporter related protein.
 
 
 0.667
yvrB
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.650
yfiZ
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.649
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.