Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| TMO_1184 | lolD | TMO_1184 | TMO_1950 | ABC transporter ATP binding protein; Belongs to the ABC transporter superfamily. | ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.753 |
| TMO_1184 | lolD-2 | TMO_1184 | TMO_2997 | ABC transporter ATP binding protein; Belongs to the ABC transporter superfamily. | ABC transporter, ATP-binding protein. | 0.893 |
| TMO_2864 | lolD | TMO_2864 | TMO_1950 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family. | ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.828 |
| TMO_2864 | lolD-2 | TMO_2864 | TMO_2997 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family. | ABC transporter, ATP-binding protein. | 0.788 |
| TMO_2864 | occM | TMO_2864 | TMO_3090 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family. | Polar amino acid transport system permease protein. | 0.488 |
| TMO_2998 | TMO_2999 | TMO_2998 | TMO_2999 | Efflux ABC transporter, permease protein. | Auxiliary transport protein, MFP family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.864 |
| TMO_2998 | lolA | TMO_2998 | TMO_3142 | Efflux ABC transporter, permease protein. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.746 |
| TMO_2998 | lolD | TMO_2998 | TMO_1950 | Efflux ABC transporter, permease protein. | ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.774 |
| TMO_2998 | lolD-2 | TMO_2998 | TMO_2997 | Efflux ABC transporter, permease protein. | ABC transporter, ATP-binding protein. | 0.963 |
| TMO_2999 | TMO_2998 | TMO_2999 | TMO_2998 | Auxiliary transport protein, MFP family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Efflux ABC transporter, permease protein. | 0.864 |
| TMO_2999 | lolD-2 | TMO_2999 | TMO_2997 | Auxiliary transport protein, MFP family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | ABC transporter, ATP-binding protein. | 0.855 |
| appD | lolD-2 | TMO_0293 | TMO_2997 | Oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily. | ABC transporter, ATP-binding protein. | 0.844 |
| lolA | TMO_2998 | TMO_3142 | TMO_2998 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Efflux ABC transporter, permease protein. | 0.746 |
| lolA | lolC | TMO_3142 | TMO_1951 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Lipoprotein-releasing system permease protein. | 0.801 |
| lolA | lolD | TMO_3142 | TMO_1950 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.686 |
| lolA | lolD-2 | TMO_3142 | TMO_2997 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC transporter, ATP-binding protein. | 0.632 |
| lolC | lolA | TMO_1951 | TMO_3142 | Lipoprotein-releasing system permease protein. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.801 |
| lolC | lolD | TMO_1951 | TMO_1950 | Lipoprotein-releasing system permease protein. | ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.997 |
| lolC | lolD-2 | TMO_1951 | TMO_2997 | Lipoprotein-releasing system permease protein. | ABC transporter, ATP-binding protein. | 0.970 |
| lolD | TMO_1184 | TMO_1950 | TMO_1184 | ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | ABC transporter ATP binding protein; Belongs to the ABC transporter superfamily. | 0.753 |
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