STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMO_2999Auxiliary transport protein, MFP family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (425 aa)    
Predicted Functional Partners:
TMO_2998
Efflux ABC transporter, permease protein.
 
   
 0.864
lolD-2
ABC transporter, ATP-binding protein.
  
 
 0.855
TMO_1383
RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.746
macB
ABC transporter related protein; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
  
 
 0.676
macB-2
ABC transporter related protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.676
silC
RND efflux system outer membrane lipoprotein.
 
 
 0.623
bepE-2
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
 
   
 0.600
bepC-2
TolC family type I secretion outer membrane protein.
 
 
 0.569
bepE
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
 
   
 0.563
TMO_2996
Hypothetical protein.
       0.553
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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