Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TMO_3046 | TMO_3047 | TMO_3046 | TMO_3047 | LmbE-like protein. | Acyl-CoA dehydrogenase. | 0.956 |
TMO_3046 | TMO_3048 | TMO_3046 | TMO_3048 | LmbE-like protein. | Glycosyl transferase family 2. | 0.953 |
TMO_3046 | TMO_3049 | TMO_3046 | TMO_3049 | LmbE-like protein. | Proline iminopeptidase; Belongs to the peptidase S33 family. | 0.437 |
TMO_3046 | eryA | TMO_3046 | TMO_0487 | LmbE-like protein. | Polyketide synthase. | 0.497 |
TMO_3047 | TMO_3046 | TMO_3047 | TMO_3046 | Acyl-CoA dehydrogenase. | LmbE-like protein. | 0.956 |
TMO_3047 | TMO_3048 | TMO_3047 | TMO_3048 | Acyl-CoA dehydrogenase. | Glycosyl transferase family 2. | 0.953 |
TMO_3047 | TMO_3049 | TMO_3047 | TMO_3049 | Acyl-CoA dehydrogenase. | Proline iminopeptidase; Belongs to the peptidase S33 family. | 0.507 |
TMO_3047 | eryA | TMO_3047 | TMO_0487 | Acyl-CoA dehydrogenase. | Polyketide synthase. | 0.670 |
TMO_3048 | TMO_3046 | TMO_3048 | TMO_3046 | Glycosyl transferase family 2. | LmbE-like protein. | 0.953 |
TMO_3048 | TMO_3047 | TMO_3048 | TMO_3047 | Glycosyl transferase family 2. | Acyl-CoA dehydrogenase. | 0.953 |
TMO_3048 | TMO_3049 | TMO_3048 | TMO_3049 | Glycosyl transferase family 2. | Proline iminopeptidase; Belongs to the peptidase S33 family. | 0.409 |
TMO_3048 | eryA | TMO_3048 | TMO_0487 | Glycosyl transferase family 2. | Polyketide synthase. | 0.594 |
TMO_3049 | TMO_3046 | TMO_3049 | TMO_3046 | Proline iminopeptidase; Belongs to the peptidase S33 family. | LmbE-like protein. | 0.437 |
TMO_3049 | TMO_3047 | TMO_3049 | TMO_3047 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Acyl-CoA dehydrogenase. | 0.507 |
TMO_3049 | TMO_3048 | TMO_3049 | TMO_3048 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Glycosyl transferase family 2. | 0.409 |
TMO_3049 | acpP-2 | TMO_3049 | TMO_1864 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Transit peptide-acyl carrier protein fusion protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.627 |
TMO_3049 | eryA | TMO_3049 | TMO_0487 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Polyketide synthase. | 0.873 |
TMO_3049 | proC | TMO_3049 | TMO_0301 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.901 |
TMO_3049 | putA | TMO_3049 | TMO_0608 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.900 |
TMO_3049 | yfgC | TMO_3049 | TMO_3050 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Peptidase M48 Ste24p. | 0.574 |
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