STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livF-10ABC transporter related protein. (285 aa)    
Predicted Functional Partners:
livM-7
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.989
livM-4
Branched chain amino acid ABC transporter inner membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.983
braE-3
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.976
TMO_3066
Branched-chain amino acid transport system substrate-binding protein.
 
  
 0.933
paaK
phenylacetate--CoA ligase.
    0.928
braD-5
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.894
livM-6
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.891
braE-2
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.851
livM
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.840
livH-4
Putative ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.836
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.