STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
siaP-2TRAP dicarboxylate transporter- DctP subunit. (356 aa)    
Predicted Functional Partners:
TMO_3128
Hypothetical protein.
 
  
 0.911
TMO_3129
TRAP dicarboxylate transporter- DctM subunit.
 
    0.893
TMO_2438
Hypothetical protein.
 
  
 0.817
siaT-6
TRAP transporter, DctM subunit subfamily.
 
    0.791
TMO_2311
TRAP dicarboxylate transporter, DctM subunit.
 
    0.766
TMO_1204
TRAP dicarboxylate transporter, DctM subunit.
 
    0.761
siaT-3
Trap dicarboxylate transporter, dctm subunit.
 
    0.700
dctP-4
C4-dicarboxylate-binding periplasmic protein.
  
     0.693
TMO_2526
TRAP dicarboxylate transporter, DctM subunit.
 
    0.692
TMO_3258
Trap dicarboxylate transporter- dctp subunit.
  
     0.691
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.