STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybbAABC transporter related protein. (229 aa)    
Predicted Functional Partners:
ybbP
ABC transporter permease ybbP.
 
  
 0.933
TMO_1184
ABC transporter ATP binding protein; Belongs to the ABC transporter superfamily.
 
    
0.855
lolC
Lipoprotein-releasing system permease protein.
 
 0.842
occM
Polar amino acid transport system permease protein.
 
      0.821
TMO_2864
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 
 
  
 0.805
tesA
SGNH hydrolase-type arylesterase.
 
     0.777
TMO_2998
Efflux ABC transporter, permease protein.
  
 
 0.774
lolA
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.632
nrtC-2
Nitrate transporter.
 
    
 0.584
macB
ABC transporter related protein; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
 
 
0.556
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.