STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMO_3423Hypothetical protein. (182 aa)    
Predicted Functional Partners:
TMO_3421
LPS-assembly lipoprotein.
 
     0.887
TMO_2889
Hypothetical protein.
  
     0.775
TMO_1815
Hypothetical protein.
  
     0.773
TMO_3425
Outer membrane protein (porin).
 
   
 0.772
TMO_3426
Outer membrane protein (porin).
 
   
 0.772
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.771
TMO_3424
Outer membrane protein (porin).
 
   
 0.770
yfgL
PQQ enzyme repeat family protein.
  
    0.766
mrdA
Penicillin binding protein 2.
  
     0.748
TMO_1839
Hypothetical protein.
  
     0.742
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.