STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMO_3426Outer membrane protein (porin). (365 aa)    
Predicted Functional Partners:
TMO_3427
Sulfotransferase.
 
    0.784
TMO_3423
Hypothetical protein.
 
   
 0.772
TMO_1839
Hypothetical protein.
  
     0.771
TMO_2889
Hypothetical protein.
  
     0.767
TMO_0823
Surface lipoprotein.
 
 
 
 0.761
TMO_0763
Cell shape-determining protein.
  
     0.759
TMO_2991
Hypothetical protein.
  
     0.759
TMO_0923
Hypothetical protein.
  
     0.757
TMO_0031
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
     0.745
TMO_0922
Hypothetical protein.
  
     0.735
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.