STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phbC-4Poly-beta-hydroxybutyrate polymerase domain protein. (660 aa)    
Predicted Functional Partners:
phbB
acetoacetyl-CoA reductase.
 
 
 0.965
TMO_3147
Intracellular PHB depolymerase.
 
  
 0.964
TMO_2893
MaoC-like dehydratase.
 
  
 0.939
phbC
Polyhydroxyalkanoate synthase.
  
  
 
0.927
phbC-3
Poly-beta-hydroxybutyrate polymerase.
  
  
 
0.913
TMO_2569
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
 0.730
TMO_0156
Polyhydroxyalkanoate synthesis repressor PhaR.
 
   
 0.722
TMO_2112
Patatin.
 
   
 0.666
yedA
Inner membrane transporter yedA.
       0.541
TMO_3479
Hypothetical protein.
       0.520
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.