STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMO_3515Universal stress family protein. (170 aa)    
Predicted Functional Partners:
TMO_3514
Hypothetical protein.
 
     0.940
TMO_3513
Putative permease.
 
   
 0.938
TMO_2991
Hypothetical protein.
  
     0.627
TMO_2745
Hypothetical protein.
  
     0.597
TMO_3454
Hypothetical protein.
  
     0.582
TMO_1003
Hypothetical protein; Belongs to the UPF0262 family.
  
     0.574
ygaU
Protein containing LysM domain.
 
   
 0.571
TMO_2451
Hypothetical protein.
  
     0.569
TMO_3180
Disulfide bond formation protein, DsbB family.
  
     0.558
TMO_0266
Zinc-finger protein.
  
     0.553
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.