Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Mhar_1539 | Mhar_1540 | Permease. | Lipoprotein, putative. | 0.519 |
Mhar_1539 | Mhar_1541 | Permease. | Cytochrome c biogenesis protein, transmembrane region. | 0.579 |
Mhar_1539 | Mhar_1542 | Permease. | Hypothetical protein. | 0.419 |
Mhar_1539 | Mhar_1543 | Permease. | Redox-active disulfide protein 2; Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro. | 0.868 |
Mhar_1539 | Mhar_1544 | Permease. | Hypothetical protein. | 0.699 |
Mhar_1540 | Mhar_1539 | Lipoprotein, putative. | Permease. | 0.519 |
Mhar_1540 | Mhar_1541 | Lipoprotein, putative. | Cytochrome c biogenesis protein, transmembrane region. | 0.638 |
Mhar_1540 | Mhar_1542 | Lipoprotein, putative. | Hypothetical protein. | 0.596 |
Mhar_1540 | Mhar_1543 | Lipoprotein, putative. | Redox-active disulfide protein 2; Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro. | 0.526 |
Mhar_1540 | Mhar_1544 | Lipoprotein, putative. | Hypothetical protein. | 0.520 |
Mhar_1541 | Mhar_1539 | Cytochrome c biogenesis protein, transmembrane region. | Permease. | 0.579 |
Mhar_1541 | Mhar_1540 | Cytochrome c biogenesis protein, transmembrane region. | Lipoprotein, putative. | 0.638 |
Mhar_1541 | Mhar_1542 | Cytochrome c biogenesis protein, transmembrane region. | Hypothetical protein. | 0.741 |
Mhar_1541 | Mhar_1543 | Cytochrome c biogenesis protein, transmembrane region. | Redox-active disulfide protein 2; Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro. | 0.739 |
Mhar_1541 | Mhar_1544 | Cytochrome c biogenesis protein, transmembrane region. | Hypothetical protein. | 0.644 |
Mhar_1542 | Mhar_1539 | Hypothetical protein. | Permease. | 0.419 |
Mhar_1542 | Mhar_1540 | Hypothetical protein. | Lipoprotein, putative. | 0.596 |
Mhar_1542 | Mhar_1541 | Hypothetical protein. | Cytochrome c biogenesis protein, transmembrane region. | 0.741 |
Mhar_1542 | Mhar_1543 | Hypothetical protein. | Redox-active disulfide protein 2; Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro. | 0.750 |
Mhar_1542 | Mhar_1544 | Hypothetical protein. | Hypothetical protein. | 0.682 |
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