STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
holBUnannotated protein. (346 aa)    
Predicted Functional Partners:
VTHSUH11_07750
Unannotated protein.
 
 
 0.992
dnaN
Unannotated protein; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication [...]
 
 
 0.990
VTHSUH11_03230
Unannotated protein.
  
 0.988
PAGU1578_15740
Unannotated protein.
   
 0.987
polC
Unannotated protein; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
 0.948
PAGU1578_12440
Unannotated protein.
 
 
 0.919
VTHSUH11_03835
Unannotated protein.
   
 0.906
dnaX
Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
  
 
0.832
PAGU1578_14060
Unannotated protein.
  
   0.825
PAGU1578_01490
Unannotated protein.
    
 
 0.814
Your Current Organism:
Veillonella tobetsuensis
NCBI taxonomy Id: 1110546
Other names: ATCC BAA-2400, JCM 17976, V. tobetsuensis, Veillonella sp. A16, Veillonella sp. B4, Veillonella sp. IM-2011, Veillonella sp. JCM 17976, Veillonella sp. Y6, Veillonella tobetsuensis Mashima et al. 2013, strain B16
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.