STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HR09_02330Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)    
Predicted Functional Partners:
HR09_02335
DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.923
lon
Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
       0.794
HR09_08980
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.760
HR09_10715
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
HR09_05485
OstA-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.707
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.687
HR09_06360
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.670
HR09_03340
uroporphyrinogen-III synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.665
HR09_02050
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.660
HR09_07685
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.640
Your Current Organism:
Porphyromonas gulae
NCBI taxonomy Id: 111105
Other names: ATCC 51700, CCUG 47701, DSM 15663, JCM 13865, NCTC 13180, P. gulae, Porphyromonas gulae Fournier et al. 2001 emend. Hahnke et al. 2016, strain Loup 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.