STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HR09_06035Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa)    
Predicted Functional Partners:
HR09_10520
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.764
HR09_06340
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.733
HR09_02845
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.702
HR09_07080
tRNA nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
     0.667
HR09_09915
Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.662
HR09_04620
Anaphase-promoting protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
HR09_06040
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.613
HR09_10495
RNA polymerase Rpb6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.611
HR09_10855
Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.605
HR09_09940
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.599
Your Current Organism:
Porphyromonas gulae
NCBI taxonomy Id: 111105
Other names: ATCC 51700, CCUG 47701, DSM 15663, JCM 13865, NCTC 13180, P. gulae, Porphyromonas gulae Fournier et al. 2001 emend. Hahnke et al. 2016, strain Loup 1
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