STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HR09_10570Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (170 aa)    
Predicted Functional Partners:
HR09_10325
Epoxyqueuosine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.793
HR09_00300
Sugar synthetase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
      0.654
HR09_10565
Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.606
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
 
 
 0.554
HR09_04780
RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
   0.547
HR09_05410
Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.512
HR09_10060
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.
  
  
 0.400
Your Current Organism:
Porphyromonas gulae
NCBI taxonomy Id: 111105
Other names: ATCC 51700, CCUG 47701, DSM 15663, JCM 13865, NCTC 13180, P. gulae, Porphyromonas gulae Fournier et al. 2001 emend. Hahnke et al. 2016, strain Loup 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.