STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPUR_02778Probable ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (75 aa)    
Predicted Functional Partners:
CPUR_03584
Probable 40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.999
CPUR_04863
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.999
CPUR_06566
Probable ribosomal protein L21.e.A, cytosolic.
   
 0.999
CPUR_06879
Probable RPL28-60S large subunit ribosomal protein L27a.e; Belongs to the universal ribosomal protein uL15 family.
   
 0.999
CPUR_06925
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.999
CPUR_08571
Probable ribosomal protein L31.e.A, cytosolic.
   
 0.999
CPUR_03583
Probable 60s ribosomal protein L7 subunit.
   
 0.999
CPUR_04064
Probable ribosomal protein L23a, cytosolic.
   
 0.999
CPUR_00384
Probable ribosomal protein L26.
   
 0.999
CPUR_01009
Probable RPS16B-ribosomal protein S16.e; Belongs to the universal ribosomal protein uS9 family.
   
 0.999
Your Current Organism:
Claviceps purpurea
NCBI taxonomy Id: 1111077
Other names: C. purpurea 20.1, Claviceps purpurea 20.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.