STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPUR_04806Related to NOL1R protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (607 aa)    
Predicted Functional Partners:
CPUR_02715
Related to excision repair protein RAD4.
   
 
 0.941
CPUR_04766
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
  
 
 0.940
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.932
CPUR_00711
Related to RNA binding protein.
   
 
 0.919
CPUR_02448
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.918
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.910
CPUR_06072
Related to RNA processing factor 1.
   
 
 0.907
CPUR_06073
Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.
   
 
 0.907
CPUR_01688
Related to methionyl-tRNA formyltransferase, mitochondrial.
  
  
 0.904
CPUR_03293
Probable NSA2-involved in biogenesis of ribosomal large subunit.
   
 
 0.904
Your Current Organism:
Claviceps purpurea
NCBI taxonomy Id: 1111077
Other names: C. purpurea 20.1, Claviceps purpurea 20.1
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