STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPUR_06612Related to VPS25-vacuolar protein sorting. (191 aa)    
Predicted Functional Partners:
CPUR_01025
Related to SNF8 protein, involved in glucose derepression.
   
 0.999
CPUR_05122
Related to VPS36 protein, involved in vacuolar protein sorting.
   
 0.999
CPUR_00423
Uncharacterized protein.
   
 0.996
CPUR_02714
Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.987
CPUR_07102
Related to SNF7 protein.
    
 0.920
CPUR_01001
Probable class E vacuolar-protein sorting and endocytosis factor.
   
 0.894
CPUR_03452
Related to component of actin cortical patches LAS17.
   
 0.878
CPUR_01955
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
    
 0.844
CPUR_07735
Related to protein SNF7.
    
 0.838
CPUR_00372
Related to endosomal Vps protein complex subunit.
     
 0.828
Your Current Organism:
Claviceps purpurea
NCBI taxonomy Id: 1111077
Other names: C. purpurea 20.1, Claviceps purpurea 20.1
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