STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERT58051.1Glycosyltransferase-like protein, family 2. (409 aa)    
Predicted Functional Partners:
ERT58063.1
Amino acid kinase family protein; Belongs to the aspartokinase family.
 
     0.853
ERT58052.1
Hypothetical protein.
    
  0.835
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
  
 0.806
ERT61381.1
Polysaccharide deacetylase.
 
 
 0.764
fbp
Firmicute fructose-1,6-bisphosphatase.
       0.753
ERT62040.1
Tetratricopeptide repeat protein.
 
 
 0.713
ERT58113.1
ABC transporter, ATP-binding protein.
       0.710
ERT61567.1
Tetratricopeptide repeat protein.
 
 
 0.708
ERT60450.1
Peptidase family M49 domain protein.
 
   0.654
ERT56587.1
GHKL domain protein.
  
 
 0.651
Your Current Organism:
Prevotella sp. BV3P1
NCBI taxonomy Id: 1111130
Other names: P. sp. BV3P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.