STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000427865_00402Unannotated protein. (335 aa)    
Predicted Functional Partners:
GCA_000427865_02464
Unannotated protein.
    
 0.576
GCA_000427865_00401
Unannotated protein.
       0.557
GCA_000427865_00831
Unannotated protein.
  
  0.482
GCA_000427865_01289
Unannotated protein.
  
 
  0.471
GCA_000427865_01291
Unannotated protein.
  
 
  0.445
GCA_000427865_02389
Unannotated protein.
 
 
 0.429
GCA_000427865_00830
Unannotated protein.
 
    0.425
GCA_000427865_00571
Unannotated protein.
   
 
  0.414
Your Current Organism:
Corynebacterium sputi
NCBI taxonomy Id: 1111729
Other names: C. sputi DSM 45148, Corynebacterium sputi DSM 45148, Corynebacterium sputi IMMIB L-999, Corynebacterium sputi str. DSM 45148, Corynebacterium sputi strain DSM 45148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.