STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0630_03530Unannotated protein. (353 aa)    
Predicted Functional Partners:
C0630_03535
Unannotated protein.
 
  
 0.934
trmB
Unannotated protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
    0.623
GCA_000428045_01349
Unannotated protein.
 
     0.579
C0630_04270
Unannotated protein.
 
  
 0.572
atpB
Unannotated protein; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
    
  0.570
atpH
Unannotated protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
    
  0.565
atpA
Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
  0.565
GCA_000428045_00641
Unannotated protein.
   
    0.560
GCA_000428045_01719
Unannotated protein.
   
    0.560
GCA_000428045_02045
Unannotated protein.
    
  0.541
Your Current Organism:
Sedimenticola selenatireducens
NCBI taxonomy Id: 1111735
Other names: S. selenatireducens DSM 17993, Sedimenticola selenatireducens AK4OH1, Sedimenticola selenatireducens DSM 17993, Sedimenticola selenatireducens str. DSM 17993, Sedimenticola selenatireducens strain DSM 17993, selenate-reducing bacterium AK4OH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.