STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0630_15510Unannotated protein. (160 aa)    
Predicted Functional Partners:
C0630_15960
Unannotated protein.
   
 0.860
C0630_08910
Unannotated protein.
  
 0.801
C0630_14350
Unannotated protein.
 
 
 0.750
C0630_10160
Unannotated protein.
  
 
 0.746
C0630_10720
Unannotated protein.
  
 
 0.746
C0630_02975
Unannotated protein.
     
 0.743
C0630_14275
Unannotated protein; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.712
C0630_17010
Unannotated protein.
  
 
 0.705
C0630_05960
Unannotated protein.
  
 0.697
GCA_000428045_03663
Unannotated protein.
  
   0.689
Your Current Organism:
Sedimenticola selenatireducens
NCBI taxonomy Id: 1111735
Other names: S. selenatireducens DSM 17993, Sedimenticola selenatireducens AK4OH1, Sedimenticola selenatireducens DSM 17993, Sedimenticola selenatireducens str. DSM 17993, Sedimenticola selenatireducens strain DSM 17993, selenate-reducing bacterium AK4OH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.