STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0630_00635Unannotated protein. (839 aa)    
Predicted Functional Partners:
C0630_00630
Unannotated protein.
     0.982
C0630_00640
Unannotated protein.
 
 0.966
lolA
Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.890
C0630_13105
Unannotated protein.
  
 0.837
lolD
Unannotated protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
  
 0.837
C0630_19600
Unannotated protein.
  
 0.837
C0630_09255
Unannotated protein.
  
 0.836
C0630_13025
Unannotated protein.
  
 0.767
C0630_05810
Unannotated protein.
  
 0.767
C0630_00645
Unannotated protein.
       0.550
Your Current Organism:
Sedimenticola selenatireducens
NCBI taxonomy Id: 1111735
Other names: S. selenatireducens DSM 17993, Sedimenticola selenatireducens AK4OH1, Sedimenticola selenatireducens DSM 17993, Sedimenticola selenatireducens str. DSM 17993, Sedimenticola selenatireducens strain DSM 17993, selenate-reducing bacterium AK4OH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.