STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000427825_00887Unannotated protein. (256 aa)    
Predicted Functional Partners:
GCA_000427825_02578
Unannotated protein.
  
     0.690
GCA_000427825_03027
Unannotated protein.
  
   
 0.619
GCA_000427825_00496
Unannotated protein.
  
     0.565
GCA_000427825_00323
Unannotated protein.
  
  
 0.483
GCA_000427825_01080
Unannotated protein.
 
   
 0.472
GCA_000427825_01082
Unannotated protein.
 
 
 
 0.458
GCA_000427825_01686
Unannotated protein.
  
     0.445
GCA_000427825_01320
Unannotated protein.
  
   
 0.443
GCA_000427825_03206
Unannotated protein.
 
  
 0.441
GCA_000427825_04040
Unannotated protein.
 
  
 0.436
Your Current Organism:
Thermocrispum municipale
NCBI taxonomy Id: 1111737
Other names: T. municipale DSM 44069, Thermocrispum municipale DSM 44069, Thermocrispum municipale IFO 15806, Thermocrispum municipale str. DSM 44069, Thermocrispum municipale strain DSM 44069
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.