STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000427825_01877Unannotated protein. (175 aa)    
Predicted Functional Partners:
GCA_000427825_03888
Unannotated protein.
  
     0.773
GCA_000427825_00627
Unannotated protein.
  
     0.561
GCA_000427825_02264
Unannotated protein.
  
     0.516
GCA_000427825_03289
Unannotated protein.
  
     0.506
GCA_000427825_01876
Unannotated protein.
       0.485
GCA_000427825_01878
Unannotated protein.
       0.468
GCA_000427825_01879
Unannotated protein.
       0.468
GCA_000427825_01849
Unannotated protein.
  
     0.460
GCA_000427825_03582
Unannotated protein.
 
   
 0.457
GCA_000427825_01875
Unannotated protein.
 
     0.423
Your Current Organism:
Thermocrispum municipale
NCBI taxonomy Id: 1111737
Other names: T. municipale DSM 44069, Thermocrispum municipale DSM 44069, Thermocrispum municipale IFO 15806, Thermocrispum municipale str. DSM 44069, Thermocrispum municipale strain DSM 44069
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.